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Publications

  • 2024
    Ribosome demand links transcriptional bursts to protein expression noise Pal S., Ray U., Dhar R† eLife (2024)
  • 2024
    Exaptation and de novo mutations transcend cryptic variations as drivers of adaptation in yeast Routh S., Lindsay R., Gudelj I., Dhar R† bioRxiv (2024)
  • 2024
    Living in a noisy world: origins of gene expression noise and its role in cellular decision-making Pal S., Dhar R† FEBS Letters (2024, in press)
  • 2024
    Increased heterogeneity in expression of genes associated with cancer progression and drug resistance Bose A., Datta S., Mandal R., Ray U., Dhar R† Translational Oncology 41:101879 (2024)
  • 2022
    Transcription factor binding process is the primary driver of noise in gene expression Parab L*, Pal S*, Dhar R† PLoS Genetics 18:e1010535 (2022)
  • 2022
    EpICC: A Bayesian neural network model with uncertainty correction for a more accurate classification of cancer Joshi P., Dhar R† Scientific Reports 12:14628 (2022)
  • 2022
    Designer bacterial cell factories for improved production of commercially valuable non-ribosomal peptides Mitra S., Dhar R†, Sen R† Biotechnol Adv. 60:108023 (2022)
  • 2022
    A large-scale computational screen identifies strong potential inhibitors for disrupting SARS-CoV-2 S-protein and human ACE2 interaction Singh A., Dhar R† J Biomol Struct Dyn. 40:9004-9017 (2022)
  • 2021
    A two-step PCR assembly for construction of gene variants across large mutational distances Routh S*, Acharyya A*, Dhar R† Biology Methods and Protocols 6:bpab007 (2021)
  • 2020
    Role of mitochondria in generation of phenotypic heterogeneity in yeast Dhar R† Journal of the Indian Institute of Science 100:497-514 (2020)
  • 2019
    Changes in gene expression predictably shift and switch genetic interactions Li X., Lalic J., Baeza-Centurion P., Dhar R., Lehner B. Nature Communications 10:3886 (2019)
  • 2019
    Single cell functional genomics reveals the importance of mitochondria in cell-to-cell phenotypic variation Dhar R†, Missarova A. M., Lehner B*, Carey L. B* eLife 8:e38904 (2019)
  • 2016
    Liquid Phase Separation as a Mechanism of Overexpression-induced Dosage Sensitivity Bolognesi B, Gotor NL, Dhar R, Cirillo D, Baldrighi M, Tartaglia GG, Lehner B. Cell Reports 16: 222–231 (2016)
  • 2015
    Slow growing cells within isogenic populations have increased RNA polymerase error rates and DNA damage van Dijk D., Dhar R., Missarova A. M., Espinar L., Blevins W., Lehner B., Carey L. B. Nature Communications 6:7972 (2015)
  • 2014
    Increased gene dosage plays a predominant role in the initial stages of evolution of duplicate TEM-1 beta lactamase genes Dhar R, Bergmiller T, Wagner A. Evolution 68:1775-1791 (2014)
  • 2013
    Yeast adapts to a changing stressful environment by evolving cross-protection and anticipatory gene regulation Dhar R., Sägesser R., Weikert C., Wagner A. Molecular Biology and Evolution 30:573-588 (2013)
  • 2011
    Adaptation of Saccharomyces cerevisiae to saline stress through laboratory evolution Dhar R., Sägesser R., Weikert C., Yuan J., Wagner A. Journal of Evolutionary Biology 24:1135-1153 (2011)
  • 2009
    Analyzing the catalytic mechanism of protein tyrosine phosphatase PtpB from Staphylococcus aureus through site-directed mutagenesis Mukherjee S*, Dhar R*, Das AK. International Journal of Biological Macromolecules 45:463-469 (2009) (* equal contribution)
  • 2009
    Interface of apoptotic protein complexes has distinct properties Mitra P, Dhar R, Pal D. In Silico Biology 9:365-378 (2009)